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surface objects plugin  (Oxford Instruments)


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    Structured Review

    Oxford Instruments surface objects plugin
    Surface Objects Plugin, supplied by Oxford Instruments, used in various techniques. Bioz Stars score: 99/100, based on 44266 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/surface+plugin/Imaris/pm41996240-383-4-9
    Average 99 stars, based on 44266 article reviews
    surface objects plugin - by Bioz Stars, 2026-09
    99/100 stars

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    Related Articles

    other:

    Article Title: Mouse Brain Lymphatic Vessels.
    Article Snippet: This study provides evidence of lymphatic vessels in the mouse brain, specifically in the cortex, thalamus, and hippocampus.. Using confocal microscopy, Western blotting, and real-time PCR, lymphatic vessels were identified by the expression of Lyve1, Prox1, and VEGFC, alongside endothelial markers CD31 and CD34.. Paraffin-embedded brain slices from wild-type Balb/ C mice were stained with antibodies against Lyve1, CD31, and CD34, revealing lymphatic vessels through 2D and 3D imaging.

    Article Title: Stress-induced mitochondrial fragmentation in endothelial cells disrupts blood-retinal barrier integrity causing neurodegeneration
    Article Snippet: 3D reconstruction of mitochondria was carried out using the Surface plugin of Imaris software (Bitplane, South Windsor, CT), mitochondrial volume was calculated and normalized relative to vessel volume.

    Article Title: Restoration of mitochondria axonal transport by adaptor Disc1 supplementation prevents neurodegeneration and rescues visual function.
    Article Snippet: 3D reconstruction of mitochondria and mitochondria-bearing axons over a 100-mm segment was carried out using the Surface plugin of Imaris software (Bitplane, South Windsor, CT).

    Article Title: Stress-induced mitochondrial fragmentation in endothelial cells disrupts blood-retinal barrier integrity causing neurodegeneration
    Article Snippet: We carried out a 3D reconstruction of mitochondria using the Surface plugin of Imaris software (Bitplane, South Windsor, CT).

    Expressing:

    Article Title: Morphogen gradient orchestrates pattern-preserving tissue morphogenesis via motility-driven unjamming
    Article Snippet: .. Analysis of mesendoderm donor cell sphericity The Surface plugin of Imaris was used to automatically segment the surface of the transplanted mesendoderm cell clusters, based on their EGFP-CAAX expression in Tg(gsc::EGFP-CAAX) embryos, and output their sphericity values (defined as ππ 1 3 (6 × volume) 2 3 /area , so that a perfect sphere would have a sphericity of 1). ..

    Article Title: Morphogen gradient orchestrates pattern-preserving tissue morphogenesis via motility-driven (un)jamming
    Article Snippet: .. The Surface plugin of Imaris was then used to automatically segment the surface of the transplanted mesendoderm cell clusters, based on their EGFP-CAAX expression. ..

    Immunostaining:

    Article Title: Reduced somatosensory innervation alters the skeletal transcriptome at a single cell level in a mouse model of type 2 diabetes
    Article Snippet: Digital images were captured with 10–20× objectives using upright fluorescent microscopy (Leica DM6, Leica Microsystems Inc., Buffalo Grove, IL) or confocal microscopy (Zeiss LSM780 FCS, Carl Zeiss Microscopy GmbH, Jena, Germany). .. For immunostaining analysis, the surface plugin in Imaris software v9.3 (Oxford Instruments, Belfast, UK) was used, six random 20x three-dimensional volumetric regions of interest (200*1 000*40 pixels) were analyzed per sample which were centered around the periosteum. ..

    Article Title: Reduced somatosensory innervation alters the skeletal transcriptome at a single cell level in a mouse model of type 2 diabetes.
    Article Snippet: Digital images were captured with 10–20× objectives using upright fluorescent microscopy (Leica DM6, Leica Microsystems Inc., Buffalo Grove, IL) or confocal microscopy (Zeiss LSM780 FCS, Carl Zeiss Microscopy GmbH, Jena, Germany). .. For immunostaining analysis, the surface plugin in Imaris software v9.3 (Oxford Instruments, Belfast, UK) was used, six random 20x three-dimensional volumetric regions of interest (200*1 000*40 pixels) were analyzed per sample which were centered around the periosteum. ..



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